| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Aruwimi | River (basin) | native | 101841 |
| Congo | River (basin) | native | 101841 |
| Cuanza | River (basin) | questionable | 120641 |
| Cuvo | River (basin) | native | 120641 |
| Ethiopian | Zoogeographic realm | endemic | 3820 |
| Itimbiri | River (basin) | native | 106290 |
| Kasai | River (basin) | native | 101841 |
| Kunene | River (basin) | native | 120641 |
| Kwango | River (basin) | native | 2988 |
| Léfini-Likouala | River (basin) | native | 44840 |
| Lindi-Tshopo | River (basin) | native | 101841 |
| Lower Congo | River (basin) | misidentification | 101841 |
| Lualaba | River (basin) | native | 101841 |
| Middle Congo | River (basin) | native | 106245 |
| Mweru | Lake | native | 101841 |
| Sankuru | River (basin) | native | 101841 |
| Upper Lualaba | River (basin) | native | 101841 |
| Wagenia Falls | River (basin) | native | 101841 |