| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5316 |
| Arabian Sea | Sea/Bay/Gulf | native | 5316 |
| Australian | Zoogeographic realm | native | 5316 |
| Ethiopian | Zoogeographic realm | native | 4967 |
| Indian Ocean | Sea/Bay/Gulf | native | 4127 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5316 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 5399 |
| Mekong | River (basin) | questionable | 12693 |
| North Australian Shelf | Sea/Bay/Gulf | native | 5316 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 5316 |
| Oriental | Zoogeographic realm | native | 7223 |
| Pacific Ocean | Sea/Bay/Gulf | native | 5316 |
| Palearctic | Zoogeographic realm | native | 5316 |
| Persian Gulf | Sea/Bay/Gulf | native | 5316 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Sabaki | River (basin) | native | 52331 |
| Shihtsao River | River (basin) | native | 36073 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Tanshui River | River (basin) | native | 36073 |
| West Philippine Sea | Sea/Bay/Gulf | native | 5399 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |